Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0065_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0065_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATCTATGAGGAGGCAT-P0065_2, AGTGGACAGGCCTTAG-P0065_2, TCGATTAAGGCTACTG-P0065_2, ATTACCGCACAAACTT-P0065_2, AAGCGAATCAACAAGG-P0065_2 (top 5 of 3959 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0065_2.gz 2.26 GB 149cf04152e8e9562b495824cb4b0dfa
P0065_2.gz.tbi 1.09 MB 9959e243d11a144fab53e2e3d11f9738
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB f3f53f4ecb5bdd9315a135ed5270fc47
statistics/