Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0066_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0066_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACACTAGGTATTACCC-P0066_1, TCATACTTCGCGACAC-P0066_1, GCCACACAGCACAGGG-P0066_1, TGGACCGGTCCCGGAA-P0066_1, CCAAATCAGCACAGGG-P0066_1 (top 5 of 3974 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0066_1.gz 3.04 GB 0e3f5a0a162e4a6d3e1415103a853d1f
P0066_1.gz.tbi 1.25 MB 181a59884e03ea3f3299a56d8a695a7d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB c5cee9ed51333c99e2f7adcb9221e203
statistics/