Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0067_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0067_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AGCCAGTGTTGCACGG-P0067_1, TATTGACCATGACTAT-P0067_1, GATTCCTGTTAATGCG-P0067_1, AAGCGAGGTATTGGAT-P0067_1, TCCATGCTCATGGTGT-P0067_1 (top 5 of 8234 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0067_1.gz 1.96 GB 59e6352e3699fec04fafb579fc4474fd
P0067_1.gz.tbi 1006.78 KB 3713b26be3e00c88f988fad3e7cf3ef9
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB def784f824416e8dc411dc12377bc676
statistics/