Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0067_3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0067_3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTTCCTTCATGAGTTT-P0067_3, TATGACATCATGGTTA-P0067_3, CTCCTGAGTACAATGT-P0067_3, ATTAACCCAACACCTA-P0067_3, TTTCTCACAGGAACTG-P0067_3 (top 5 of 3877 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0067_3.gz 1.67 GB 5da982977174664a7f63bb5b5293d3cb
P0067_3.gz.tbi 946.66 KB f15a4e737553c1c9ff1f21f91d9aa636
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 5d6d2d04acf83e6f284fb1cea5a6f0d1
statistics/