Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0067_4content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0067_4
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACTAACCAGCCGCAGT-P0067_4, ACAGGTAAGCAGCTCA-P0067_4, ATCCATAAGGACTTAC-P0067_4, AGCACTTAGCATGGTT-P0067_4, GGTTCCCGTTAGTACG-P0067_4 (top 5 of 5333 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0067_4.gz 2.51 GB 9a442e982cbd42c7107e97370f5baf4c
P0067_4.gz.tbi 1.17 MB df8d7406ad9d77a72dc32db9cd87151b
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB f7649d406b71fbc9087495a9bd7b6852
statistics/