Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0067_5content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0067_5
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TAGCGCGGTGACATGC-P0067_5, CTAGTGAGTTTCGCGC-P0067_5, AGCTAGTTCCCATAGG-P0067_5, GTTTGTTTCCTAGTTT-P0067_5, TGCTCCGTCCAGGTCA-P0067_5 (top 5 of 7104 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0067_5.gz 3.09 GB 6f4ddc55c5c071bbb57e7afcf434e486
P0067_5.gz.tbi 1.27 MB 0c9772aeb162537e27e902e30918760a
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB bfb9e1ecb23400212011689b2e59f666
statistics/