Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0068_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0068_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTTAAGTGTTAAGGTT-P0068_2, GCTGAGGAGTTTGCGG-P0068_2, CTGAATATCTTTAAGG-P0068_2, GGCTCAATCCAAACAC-P0068_2, GTTTGTCGTATGGTGC-P0068_2 (top 5 of 4416 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0068_2.gz 2.55 GB b067f6cd88aef7f9922bdbd41121eb36
P0068_2.gz.tbi 1.13 MB 2adfe0a89851983f6d847ff1793402e1
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB b1c84cd6c772a67f2eb7e56ddd45fc82
statistics/