Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0068_3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0068_3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GCGAGTGAGGTCTTGG-P0068_3, CCGTGCTGTTTACGTC-P0068_3, CTCATCATCCCTGTTA-P0068_3, GCAGGTGAGGCATTGT-P0068_3, AATCCTAAGTGAGCGG-P0068_3 (top 5 of 7704 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0068_3.gz 3.05 GB 7632ab2d9a6bd742a467c8f250f2b094
P0068_3.gz.tbi 1.27 MB 70f20e23cc37de5e411d69b167d33ce7
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 905360d7375edc2b13b50df738ce2a4c
statistics/