Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0068_4content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0068_4
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CTAAATGTCATGCAAC-P0068_4, AGCAGGTAGGCTACTG-P0068_4, TTGGGCCAGGCACAGG-P0068_4, GATTAAGCAAGGTGCA-P0068_4, GGGTGAAGTGTTTGCT-P0068_4 (top 5 of 3161 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0068_4.gz 1.55 GB 4486fdd4b2dd67cedc5eb8b721803b15
P0068_4.gz.tbi 929.4 KB 41a670b98fb205431e48798d7e74a348
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB aecc70c2f8ff4cfe1250e2b220bf84f5
statistics/