Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0068_5content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0068_5
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCCGTTGTCGGTTCCT-P0068_5, ATGTTTGAGGACTTAC-P0068_5, ATGGTGCGTACAATGT-P0068_5, CACTTAAAGAGGCTAA-P0068_5, TAACCGGTCGCTATAA-P0068_5 (top 5 of 6301 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0068_5.gz 2.76 GB 741d606108eb2e8bf2b211c540d1479c
P0068_5.gz.tbi 1.2 MB 4aee2d2ff13b5ba217925cf528f17b74
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB a76a3cf9c22b50eca9c90a065a2bd800
statistics/