Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0069_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0069_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AATTACCCAGTAATAG-P0069_1, GTACTTAAGCCGCAAC-P0069_1, TAAGGACCACCTGCTC-P0069_1, GGAACCACAGGCGATA-P0069_1, GGCCTCTGTGGATTAT-P0069_1 (top 5 of 1355 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0069_1.gz 640.72 MB 0914b7ee5163775ab42208032357ad8e
P0069_1.gz.tbi 653.01 KB da0e6a3d6022710ebe7629df46058f61
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 947cc65636179f4b66af77b39bd54cec
statistics/