Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0069_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0069_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GATTAGTGTCCCGAAG-P0069_2, CCTTGCGTCATGGCTG-P0069_2, CACATACAGCAAACCT-P0069_2, CGTTTGGAGCTTTGGG-P0069_2, TAAGTAGCATTGTGTG-P0069_2 (top 5 of 1267 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0069_2.gz 620.65 MB 05641003d7344e6b051b75b390b18e6c
P0069_2.gz.tbi 646.28 KB c6ea9d79a37aba0356363f9f17f105ef
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 6fe9c7ddd79b8a7ca69968bb4b3dfab4
statistics/