Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0069_4content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0069_4
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCAATATCAACTGGGA-P0069_4, TCTCAATTCCAACTGG-P0069_4, TAGCCTGAGGGATGAC-P0069_4, ATCATGTCAGTCTATG-P0069_4, CATAGCTAGGTACCGC-P0069_4 (top 5 of 752 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0069_4.gz 351.31 MB 6e7f7fe7bcac4379056101ffee49bb62
P0069_4.gz.tbi 576.35 KB e3a5d7efdb49c39aeb340fa7370568f6
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB b7c93bdddc0e77a5db7f1123973951a3
statistics/