Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0070_3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0070_3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGTCAATCAGGGAGCT-P0070_3, GACCTTTGTGGATTAT-P0070_3, GCCCGTTGTCATAGAT-P0070_3, TGGTCATAGGTCCGTA-P0070_3, TAGACCAGTGTCACGG-P0070_3 (top 5 of 1946 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0070_3.gz 1.2 GB ce4fa343a80583ce245cc4a4274ea12d
P0070_3.gz.tbi 837.22 KB ef2d9b0dd3942a43ee11e422ac8529f2
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 3693e25e61bbf7981b12414028bc8fef
statistics/