Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0071_4content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0071_4
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CAGCAAGCAAGCTAAA-P0071_4, GTTTCAGCAACCGCCA-P0071_4, GGCTAGACATGACTAT-P0071_4, CTCATCATCCTTGCGT-P0071_4, CAGGACCTCTTGAGCG-P0071_4 (top 5 of 2471 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0071_4.gz 1.46 GB b1ae4c3606e40ea1b7a53a2ddca6b9b4
P0071_4.gz.tbi 902.11 KB a982be6b659cebc7fe00db8dab8a9b3c
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB f658f9799cf14fb98db3bd8fcde26689
statistics/