Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0073_1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0073_1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AACCGGCTCCGGGACT-P0073_1, TTGGGCGGTTTGCAGA-P0073_1, AGGTACGCACTATGGC-P0073_1, ATGTCAATCCCTGGTT-P0073_1, CGGTTATAGGCATTGT-P0073_1 (top 5 of 4427 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0073_1.gz 3.31 GB 8173aff5c4311589d3ea9d5922eebe04
P0073_1.gz.tbi 1.32 MB 4c1322efa7430026071c5b2bad48b3fa
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB e53ac19706ac1f00e6df43bd4c9eb140
statistics/