Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0073_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0073_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TAGCTAGGTTACGCGG-P0073_2, AACCGGCTCCCTCACG-P0073_2, ACTTAGTCATGAGTTT-P0073_2, AAGTTTGTCATGTTTC-P0073_2, TGCTTCCAGTCAATCA-P0073_2 (top 5 of 2584 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0073_2.gz 2.1 GB 4e2f2a11b5b598dbb7388441a58aa058
P0073_2.gz.tbi 1.06 MB 225d44ae01f6066bb4961db19d6ba618
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB ceb0ab67e5a7d2c7cf6adf337c3e2379
statistics/