Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0073_3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0073_3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGGTGATTCCGGTTAG-P0073_3, AAGTTAGCAATGAATG-P0073_3, CCGTTTGGTTCCGGGA-P0073_3, CCCAGTTTCCACCCTG-P0073_3, GTTCATTTCAGCAAAG-P0073_3 (top 5 of 720 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0073_3.gz 732.18 MB f06b7338ec272e2d5ae9119b904ce267
P0073_3.gz.tbi 696.06 KB 1d1106bfc32d6492d8a04807e45aa287
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB a5456138838e533c8f4140edcc19c2b9
statistics/