Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0073_4.h5adcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0073_4.h5ad
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGAGCACGTGCTGTAA-P0073_4, TGGATTCAGTAACGAG-P0073_4, CGCTAATAGGTGTCCA-P0073_4, CAGGGCTTCATGCAAC-P0073_4, AGGTTTGGTTGTAACG-P0073_4 (top 5 of 222 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0073_4.h5ad.gz 107.41 MB 607414626cf1d931e0c43f3e313c3757
P0073_4.h5ad.gz.tbi 582.13 KB b45937f5730b950e07d899278380ffe7
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.32 KB 7d7f7183c2979438ab15eb2a11ae3c39
statistics/