Resource

Id summary/johansen2025Crossspecies/atac_fragments/marmoset/P0074_2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: P0074_2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AAGCGAATCGCTAAGT-P0074_2, ATCACTAAGGTGCTGC-P0074_2, TGACTTAAGTTTGGTA-P0074_2, TGAGGAGGTTGCACAA-P0074_2, TGAGGCACAAATGCCC-P0074_2 (top 5 of 5330 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
P0074_2.gz 3.34 GB 404f66d29a4e456c2c3a78e8c8a9f09c
P0074_2.gz.tbi 1.33 MB 33eb95ae3c750133b2c5df56a2eb099b
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.3 KB 9e002c9b4fa7c88f77a6694d3a737cd7
statistics/