Resource

Id summary/johansen2025Crossspecies/supplementary_table/S1.1/Marmoset_qc_Groupcontent_copy
Type data_frame
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • dataset: johansen2025Crossspecies
  • sequencing_platform: Illumina
  • vendor: 10x_Genomics
Columns count unique top freq mean std min 25% 50% 75% max
Group 56 56 AMY-SLEA-BNST GABA 1 NaN NaN NaN NaN NaN NaN NaN
cell count 56.0 NaN NaN NaN 5589.875 10716.509666 49.0 462.25 1446.0 6023.25 65164.0
UMI_counts_mean 56.0 NaN NaN NaN 16422.89275 9804.106574 3456.98 7979.73575 15821.394 21799.86625 41996.894
UMI_counts_median 56.0 NaN NaN NaN 14695.339286 9097.035603 2946.0 6667.0 14716.5 19539.125 39029.5
total_genes_mean 56.0 NaN NaN NaN 4454.178179 1605.357506 1765.817 2984.94725 4615.662 5547.75825 7573.591
total_genes_median 56.0 NaN NaN NaN 4469.767857 1741.808224 1632.0 2803.75 4701.0 5650.75 7724.5
doublet_score_mean 56.0 NaN NaN NaN 0.028179 0.021201 0.003 0.017 0.025 0.03225 0.153
doublet_score_median 56.0 NaN NaN NaN 0.002804 0.006958 0.0 0.001 0.002 0.002 0.053

Files

Filename Size md5
Supplemental Table S1.1.xlsx 122.09 KB 004f994b9bf16236bcc76bc55350a0af
genomic_resource.yaml 396.0 B 27046d307264dde5885f96943a20185d
statistics/