Resource
| Id | summary/johansen2025Crossspecies/supplementary_table/S6.1/Alzheimer_european |
|---|---|
| Type | data_frame |
| Version | 0 |
| Summary |
MAGMA results. Cluster-level associations across brain cell types. - Alzheimer_european
|
| Description |
Gene-set analysis results from MAGMA, testing for associations between genetic risk for each phenotype and gene expression profiles across cell clusters. Each row represents a cell cluster, and columns include the test statistic, p-value. Results are shown for multiple phenotypes and ancestries (SCZ only). |
| Labels |
|
| Columns | count | unique | top | freq | mean | std | min | 25% | 50% | 75% | max |
|---|---|---|---|---|---|---|---|---|---|---|---|
| VARIABLE | 453 | 453 | Human-1 | 1 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| TYPE | 453 | 1 | COVAR | 453 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| NGENES | 453.0 | NaN | NaN | NaN | 16486.0 | 0.0 | 16486.0 | 16486.0 | 16486.0 | 16486.0 | 16486.0 |
| BETA | 453.0 | NaN | NaN | NaN | 0.710741 | 3.712734 | -10.034 | -1.8397 | 0.36923 | 2.84 | 10.794 |
| BETA_STD | 453.0 | NaN | NaN | NaN | 0.00202 | 0.010775 | -0.021685 | -0.004667 | 0.000661 | 0.006253 | 0.042109 |
| SE | 453.0 | NaN | NaN | NaN | 3.257311 | 1.112677 | 0.84933 | 2.3401 | 3.2974 | 4.1439 | 5.9978 |
| P | 453.0 | NaN | NaN | NaN | 0.470344 | 0.308163 | 0.0 | 0.19984 | 0.46519 | 0.73165 | 0.99836 |
Files
| Filename | Size | md5 |
|---|---|---|
| Supplemental Table S6.1.xlsx | 246.27 KB | 7c68756d4d5ffcce51a06e176f8fd2c6 |
| genomic_resource.yaml | 714.0 B | 00c4eee1ec9f4687c570d51a1469e96a |
| statistics/ |