Resource
| Id | summary/johansen2025Crossspecies/supplementary_table/S6.1/PTSD_european |
|---|---|
| Type | data_frame |
| Version | 0 |
| Summary |
MAGMA results. Cluster-level associations across brain cell types. - PTSD_european
|
| Description |
Gene-set analysis results from MAGMA, testing for associations between genetic risk for each phenotype and gene expression profiles across cell clusters. Each row represents a cell cluster, and columns include the test statistic, p-value. Results are shown for multiple phenotypes and ancestries (SCZ only). |
| Labels |
|
| Columns | count | unique | top | freq | mean | std | min | 25% | 50% | 75% | max |
|---|---|---|---|---|---|---|---|---|---|---|---|
| VARIABLE | 453 | 453 | Human-1 | 1 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| TYPE | 453 | 1 | COVAR | 453 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| NGENES | 453.0 | NaN | NaN | NaN | 16795.0 | 0.0 | 16795.0 | 16795.0 | 16795.0 | 16795.0 | 16795.0 |
| BETA | 453.0 | NaN | NaN | NaN | 4.250252 | 5.890115 | -7.7877 | -0.22987 | 3.5353 | 8.197 | 27.765 |
| BETA_STD | 453.0 | NaN | NaN | NaN | 0.006862 | 0.012899 | -0.028698 | -0.000646 | 0.008159 | 0.015695 | 0.039556 |
| SE | 453.0 | NaN | NaN | NaN | 3.505952 | 1.17502 | 0.95547 | 2.5591 | 3.5364 | 4.4468 | 6.3492 |
| P | 453.0 | NaN | NaN | NaN | 0.305742 | 0.332826 | 0.000001 | 0.025322 | 0.15697 | 0.53266 | 0.99971 |
Files
| Filename | Size | md5 |
|---|---|---|
| Supplemental Table S6.1.xlsx | 246.27 KB | 7c68756d4d5ffcce51a06e176f8fd2c6 |
| genomic_resource.yaml | 704.0 B | 7874084a63a73ab353b52df70656249c |
| statistics/ |