Resource
| Id | summary/johansen2025Crossspecies/supplementary_table/S6.1/SCZ_2022_asian |
|---|---|
| Type | data_frame |
| Version | 0 |
| Summary |
MAGMA results. Cluster-level associations across brain cell types. - SCZ_2022_asian
|
| Description |
Gene-set analysis results from MAGMA, testing for associations between genetic risk for each phenotype and gene expression profiles across cell clusters. Each row represents a cell cluster, and columns include the test statistic, p-value. Results are shown for multiple phenotypes and ancestries (SCZ only). |
| Labels |
|
| Columns | count | unique | top | freq | mean | std | min | 25% | 50% | 75% | max |
|---|---|---|---|---|---|---|---|---|---|---|---|
| VARIABLE | 453 | 453 | Human-1 | 1 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| TYPE | 453 | 1 | COVAR | 453 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| NGENES | 453.0 | NaN | NaN | NaN | 16440.0 | 0.0 | 16440.0 | 16440.0 | 16440.0 | 16440.0 | 16440.0 |
| BETA | 453.0 | NaN | NaN | NaN | 1.500265 | 3.866585 | -7.3099 | -0.9653 | 0.74807 | 3.5202 | 17.274 |
| BETA_STD | 453.0 | NaN | NaN | NaN | 0.002396 | 0.007701 | -0.016077 | -0.003075 | 0.001984 | 0.007372 | 0.027452 |
| SE | 453.0 | NaN | NaN | NaN | 3.339521 | 1.135639 | 0.91433 | 2.4262 | 3.3652 | 4.2328 | 6.2355 |
| P | 453.0 | NaN | NaN | NaN | 0.420634 | 0.284012 | 0.000228 | 0.16821 | 0.39595 | 0.65885 | 0.98111 |
Files
| Filename | Size | md5 |
|---|---|---|
| Supplemental Table S6.1.xlsx | 246.27 KB | 7c68756d4d5ffcce51a06e176f8fd2c6 |
| genomic_resource.yaml | 706.0 B | 0c3d5bb771e92e9e0b510f388262c880 |
| statistics/ |