Resource
| Id | summary/johansen2025Crossspecies/supplementary_table/S6.1/alcohol_use_european |
|---|---|
| Type | data_frame |
| Version | 0 |
| Summary |
MAGMA results. Cluster-level associations across brain cell types. - alcohol_use_european
|
| Description |
Gene-set analysis results from MAGMA, testing for associations between genetic risk for each phenotype and gene expression profiles across cell clusters. Each row represents a cell cluster, and columns include the test statistic, p-value. Results are shown for multiple phenotypes and ancestries (SCZ only). |
| Labels |
|
| Columns | count | unique | top | freq | mean | std | min | 25% | 50% | 75% | max |
|---|---|---|---|---|---|---|---|---|---|---|---|
| VARIABLE | 453 | 453 | Human-1 | 1 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| TYPE | 453 | 1 | COVAR | 453 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| NGENES | 453.0 | NaN | NaN | NaN | 16481.0 | 0.0 | 16481.0 | 16481.0 | 16481.0 | 16481.0 | 16481.0 |
| BETA | 453.0 | NaN | NaN | NaN | 4.340107 | 6.079985 | -7.744 | -0.38128 | 3.5246 | 8.1334 | 25.049 |
| BETA_STD | 453.0 | NaN | NaN | NaN | 0.006923 | 0.012592 | -0.031385 | -0.000937 | 0.00878 | 0.016014 | 0.038476 |
| SE | 453.0 | NaN | NaN | NaN | 3.618677 | 1.230023 | 0.94335 | 2.6309 | 3.6715 | 4.5874 | 6.6626 |
| P | 453.0 | NaN | NaN | NaN | 0.310422 | 0.330344 | 0.000003 | 0.027036 | 0.14621 | 0.54591 | 0.99993 |
Files
| Filename | Size | md5 |
|---|---|---|
| Supplemental Table S6.1.xlsx | 246.27 KB | 7c68756d4d5ffcce51a06e176f8fd2c6 |
| genomic_resource.yaml | 718.0 B | fbdaeb2519b506653f373c018ea8b23b |
| statistics/ |