Resource
| Id | summary/johansen2025Crossspecies/supplementary_table/S6.1/ancient_DNA_european |
|---|---|
| Type | data_frame |
| Version | 0 |
| Summary |
MAGMA results. Cluster-level associations across brain cell types. - ancient_DNA_european
|
| Description |
Gene-set analysis results from MAGMA, testing for associations between genetic risk for each phenotype and gene expression profiles across cell clusters. Each row represents a cell cluster, and columns include the test statistic, p-value. Results are shown for multiple phenotypes and ancestries (SCZ only). |
| Labels |
|
| Columns | count | unique | top | freq | mean | std | min | 25% | 50% | 75% | max |
|---|---|---|---|---|---|---|---|---|---|---|---|
| VARIABLE | 453 | 453 | Human-1 | 1 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| TYPE | 453 | 1 | COVAR | 453 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| NGENES | 453.0 | NaN | NaN | NaN | 16373.0 | 0.0 | 16373.0 | 16373.0 | 16373.0 | 16373.0 | 16373.0 |
| BETA | 453.0 | NaN | NaN | NaN | -1.637109 | 5.645509 | -19.005 | -5.5338 | -1.9772 | 1.794 | 13.283 |
| BETA_STD | 453.0 | NaN | NaN | NaN | -0.001132 | 0.015441 | -0.032501 | -0.012057 | -0.004419 | 0.005606 | 0.054107 |
| SE | 453.0 | NaN | NaN | NaN | 3.779686 | 1.28986 | 0.97197 | 2.746 | 3.8252 | 4.8064 | 6.8929 |
| P | 453.0 | NaN | NaN | NaN | 0.587428 | 0.354924 | 0.0 | 0.25374 | 0.69664 | 0.91743 | 0.99991 |
Files
| Filename | Size | md5 |
|---|---|---|
| Supplemental Table S6.1.xlsx | 246.27 KB | 7c68756d4d5ffcce51a06e176f8fd2c6 |
| genomic_resource.yaml | 718.0 B | 5e42d7aa1067050bddd3fa5669d4a306 |
| statistics/ |