Resource
| Id | summary/johansen2025Crossspecies/supplementary_table/S6.1/depression_european |
|---|---|
| Type | data_frame |
| Version | 0 |
| Summary |
MAGMA results. Cluster-level associations across brain cell types. - depression_european
|
| Description |
Gene-set analysis results from MAGMA, testing for associations between genetic risk for each phenotype and gene expression profiles across cell clusters. Each row represents a cell cluster, and columns include the test statistic, p-value. Results are shown for multiple phenotypes and ancestries (SCZ only). |
| Labels |
|
| Columns | count | unique | top | freq | mean | std | min | 25% | 50% | 75% | max |
|---|---|---|---|---|---|---|---|---|---|---|---|
| VARIABLE | 453 | 453 | Human-1 | 1 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| TYPE | 453 | 1 | COVAR | 453 | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| NGENES | 453.0 | NaN | NaN | NaN | 17087.0 | 0.0 | 17087.0 | 17087.0 | 17087.0 | 17087.0 | 17087.0 |
| BETA | 453.0 | NaN | NaN | NaN | 6.081529 | 8.407258 | -10.096 | -0.54189 | 4.4305 | 11.863 | 35.786 |
| BETA_STD | 453.0 | NaN | NaN | NaN | 0.009386 | 0.01705 | -0.036112 | -0.001248 | 0.009671 | 0.02207 | 0.05027 |
| SE | 453.0 | NaN | NaN | NaN | 3.769326 | 1.275862 | 0.98482 | 2.7936 | 3.7611 | 4.7391 | 7.0227 |
| P | 453.0 | NaN | NaN | NaN | 0.302944 | 0.357675 | 0.0 | 0.006037 | 0.13154 | 0.55901 | 0.99997 |
Files
| Filename | Size | md5 |
|---|---|---|
| Supplemental Table S6.1.xlsx | 246.27 KB | 7c68756d4d5ffcce51a06e176f8fd2c6 |
| genomic_resource.yaml | 716.0 B | 6631ee03f1939d0f585a204fbb0ba6e3 |
| statistics/ |