meta_id |
CAUSALdb unique ID for trait |
mesh_id |
Medical Subject Headings ID for trait |
trait |
Name of trait |
motifName |
Unique motif name |
organ |
Organ the cell type is found in |
celltype |
Cell type enriched with trait variants |
susie |
SuSiE posterior inclusion probability score (PIP) |
z |
Z score of gchromVAR enrichment |
p |
p value of gchromVAR enrichment |
FDR |
False discovery rate (Benjamini-Hochberg adjusted p value) |
motifChr.hg38 |
Chromosome of motif position (hg38) |
motifStart.hg38 |
Start coordinate of motif position (hg38) |
motifEnd.hg38 |
End coordinate of motif position (hg38) |
motifChr.hg19 |
Chromosome of motif position (hg19) |
motifStart.hg19 |
Start coordinate of motif position (hg19) |
motifEnd.hg19 |
End coordinate of motif position (hg19) |
snpChr.hg38 |
Chromosome of causal SNP position (hg38) |
snpPos.hg38 |
Coordinate of causal SNP position (hg38) |
snpChr.hg19 |
Chromosome of causal SNP position (hg19) |
snpPos.hg19 |
Coordinate of causal SNP position (hg19) |
rsid |
RS identifier for SNP |
adult_celltype |
Cell type of matching adult peak sets used |
found_in_X_adult_peaksets |
Number of adult peaksets overlapping causal SNP |
total_adult_peaksets |
Total number of adult peak sets examined |
found_in_min_2_peakset |
Indication of whether at least 2 adult peak sets overlap the causal SNP. "fetalOnly": < 2, "both": >=2, "notChecked": No matching adult peak sets were availabe for overlapping |