Resource

Id summary/zemke2023Conserved/rna_expression_matrix/macaquecontent_copy
Type ann_data
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • data_types: gene_expression
  • dataset: zemke2023Conserved
  • gene_models: reference/Macaque/gene_models/Mmul_10_NCBI_RefSeq
  • modalities: RNA
  • processing_level: RPKM_normalized
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • technology: 10x genomics
  • vendor: 10x_Genomics

AnnData description 


AnnData object with n_obs × n_vars = 34773 × 21369 backed at '/gpfs/commons/groups/iossifov_lab/SC_Summaries_GRR/summary/zemke2023Conserved/cell_expression/by_species/macaque/GSE229169_macaque_filtered.h5ad'
    obs: 'orig.ident', 'subclass'
    layers: None (.X)

obs description

Columns count unique top freq
orig.ident 34773 4 Dheni 9632
subclass 34773 20 ODC 12978

Files

Filename Size md5
GSE229169_macaque_filtered.h5ad 1008.86 MB 446e78a5e2214a79f5e3df659827a6c3
GSE229169_macaque_filtered_barcodes.tsv.gz 149.44 KB abe7205261ad8ff5712b07664217166a
GSE229169_macaque_filtered_features.tsv.gz 76.66 KB 456a72da7b9fd55a726b62d42219c04d
GSE229169_macaque_filtered_matrix.mtx.gz 257.84 MB 0d3db0e4350fc6497f28f96cd17b07bd
GSE229169_macaque_filtered_metadata.tsv.gz 198.78 KB 29fa5398db5f1d69e265b209818b64be
genomic_resource.yaml 900.0 B 8b4193cd0837e2e4e8982f2ba4d25fcb
statistics/