Resource

Id summary/zemke2023Conserved/rna_expression_matrix/marmosetcontent_copy
Type ann_data
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • data_types: gene_expression
  • dataset: zemke2023Conserved
  • gene_models: reference/Marmoset/gene_models/calJac240_pri_NCBI_RefSeq
  • modalities: RNA
  • processing_level: RPKM_normalized
  • reference_genome: reference/Marmoset/genome/calJac240_pri
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: marmoset
  • technology: 10x genomics
  • vendor: 10x_Genomics

AnnData description 


AnnData object with n_obs × n_vars = 34310 × 22046 backed at '/gpfs/commons/groups/iossifov_lab/SC_Summaries_GRR/summary/zemke2023Conserved/cell_expression/by_species/marmoset/GSE229169_marmoset_filtered.h5ad'
    obs: 'orig.ident', 'subclass'
    layers: None (.X)

obs description

Columns count unique top freq
orig.ident 34310 4 Peregrine_rep1 9031
subclass 34310 20 ODC 8520

Files

Filename Size md5
GSE229169_marmoset_filtered.h5ad 1008.19 MB cef8af6db3d3bbbb093cdde785047fca
GSE229169_marmoset_filtered_barcodes.tsv.gz 152.04 KB d364f5eeebf3af4763839fd87ed63dfc
GSE229169_marmoset_filtered_features.tsv.gz 77.08 KB a04f58fbdc9a3e58d2f158121e1232a1
GSE229169_marmoset_filtered_matrix.mtx.gz 255.03 MB 182715396b0681856133ba7535a5debc
GSE229169_marmoset_filtered_metadata.tsv.gz 209.23 KB a5cc7c5866284052d1d2c1436a0de771
genomic_resource.yaml 917.0 B b62adc32d2af676e3f10afe313d8a1d2
statistics/