Resource

Id summary/zemke2023Conserved/rna_expression_matrix/mousecontent_copy
Type ann_data
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • data_types: gene_expression
  • dataset: zemke2023Conserved
  • gene_models: reference/Mouse/gene_models/GRCm39_basic
  • modalities: RNA
  • processing_level: RPKM_normalized
  • reference_genome: reference/Mouse/genome/GRCm39
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: mouse
  • technology: 10x genomics
  • vendor: 10x_Genomics

AnnData description 


AnnData object with n_obs × n_vars = 47404 × 32285 backed at '/gpfs/commons/groups/iossifov_lab/SC_Summaries_GRR/summary/zemke2023Conserved/cell_expression/by_species/mouse/GSE229169_mouse_filtered.h5ad'
    obs: 'orig.ident', 'subclass'
    layers: None (.X)

obs description

Columns count unique top freq
orig.ident 47404 8 mop5d1 11838
subclass 47404 20 L2/3 IT 9492

Files

Filename Size md5
GSE229169_mouse_filtered.h5ad 1.28 GB 4379ffa8caae42207459d644e9ea1e9f
GSE229169_mouse_filtered_barcodes.tsv.gz 204.45 KB 8458f893c7ce02c3d214317c52a6ad3b
GSE229169_mouse_filtered_features.tsv.gz 115.41 KB 34f557cc568b42be043b3c238d2772ec
GSE229169_mouse_filtered_matrix.mtx.gz 338.73 MB 811bdb85bd304d7b063cd68ffe8a4cfc
GSE229169_mouse_filtered_metadata.tsv.gz 282.18 KB 84b82377c960422228d9c75d13f9bdec
genomic_resource.yaml 882.0 B 1c992604ea276d08ad8bddaac9d5d2d4
statistics/