Resource

Id summary/zemke2024Epigenetic/rna_expression_atac_matrix/hc69984content_copy
Type ann_data
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: hippocampus
  • data_types: gene_expression, peak_counts
  • dataset: zemke2024Epigenetic
  • individual_id: hc69984
  • modalities: RNA, ATAC
  • processing_level: RPKM_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

AnnData description


AnnData object with n_obs × n_vars = 678299 × 126302
    var: 'gene_ids', 'feature_types', 'genome', 'interval'
    layers: None (.X)

var description

Columns count unique top freq
gene_ids 126302 126302 ENSG00000243485 1
feature_types 126302 2 Peaks 89701
genome 126302 1 GRCh38 126302
interval 126302.0 126287.0 NaN 13.0

Files

Filename Size md5
GSE278576_hc69984_raw_feature_bc_matrix.h5 59.44 MB 00c7580a354fbf139df67a9fc82ad910
genomic_resource.yaml 919.0 B e3fd0d4f4f5ad286c1bacfff22047c58
statistics/