Resource

Id summary/zemke2024Epigenetic/rna_expression_atac_matrix/hc73787content_copy
Type ann_data
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: hippocampus
  • data_types: gene_expression, peak_counts
  • dataset: zemke2024Epigenetic
  • individual_id: hc73787
  • modalities: RNA, ATAC
  • processing_level: RPKM_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

AnnData description


AnnData object with n_obs × n_vars = 717015 × 136174
    var: 'gene_ids', 'feature_types', 'genome', 'interval'
    layers: None (.X)

var description

Columns count unique top freq
gene_ids 136174 136174 ENSG00000243485 1
feature_types 136174 2 Peaks 99573
genome 136174 1 GRCh38 136174
interval 136174.0 136159.0 NaN 13.0

Files

Filename Size md5
GSE278576_hc73787_raw_feature_bc_matrix.h5 135.28 MB 2f6272d2905200ce2299a4d3c9299bfc
genomic_resource.yaml 919.0 B 9ebb166e4cd3c9032ece8bf3c13a2ff9
statistics/