Resource

Id summary/zemke2024Epigenetic/rna_expression_atac_matrix/hc81content_copy
Type ann_data
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: hippocampus
  • data_types: gene_expression, peak_counts
  • dataset: zemke2024Epigenetic
  • individual_id: hc81
  • modalities: RNA, ATAC
  • processing_level: RPKM_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

AnnData description


AnnData object with n_obs × n_vars = 717423 × 128416
    var: 'gene_ids', 'feature_types', 'genome', 'interval'
    layers: None (.X)

var description

Columns count unique top freq
gene_ids 128416 128416 ENSG00000243485 1
feature_types 128416 2 Peaks 91815
genome 128416 1 GRCh38 128416
interval 128416.0 128401.0 NaN 13.0

Files

Filename Size md5
GSE278576_hc81_raw_feature_bc_matrix.h5 102.59 MB 6f55c058f072cceee298685a1a2a4589
genomic_resource.yaml 910.0 B d4b26ea1db63f8df92c6e9a306114b94
statistics/