Resource

Id summary/zemke2024Epigenetic/rna_expression_atac_matrix/hc935content_copy
Type ann_data
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: hippocampus
  • data_types: gene_expression, peak_counts
  • dataset: zemke2024Epigenetic
  • individual_id: hc935
  • modalities: RNA, ATAC
  • processing_level: RPKM_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

AnnData description


AnnData object with n_obs × n_vars = 716993 × 165940
    var: 'gene_ids', 'feature_types', 'genome', 'interval'
    layers: None (.X)

var description

Columns count unique top freq
gene_ids 165940 165940 ENSG00000243485 1
feature_types 165940 2 Peaks 129339
genome 165940 1 GRCh38 165940
interval 165940.0 165925.0 NaN 13.0

Files

Filename Size md5
GSE278576_hc935_raw_feature_bc_matrix.h5 147.39 MB b45ea348904e3aa253e06c172cf107ab
genomic_resource.yaml 913.0 B 37b375c70938f17cc94d60996c3be4d9
statistics/